Comprehensive codon usage analysis of porcine deltacoronavirus
نویسندگان
چکیده
منابع مشابه
Porcine Deltacoronavirus in Mainland China
To the Editor: Porcine deltacoronavirus (PDCoV) was discovered in 2012, during a study to identify new coronaviruses in mammals and birds in Hong Kong (1). In February 2014, this novel porcine coronavirus was detected in pigs in Ohio, United States (2), and has since been reported in at least 17 US states (3–5). Concern regarding the epidemiology, evolution, and pathogenicity of this emerging v...
متن کاملGCUA: general codon usage analysis
UNLABELLED The program General Codon Usage Analysis (GCUA) has been developed for analysing codon and amino acid usage patterns. AVAILABILITY ftp://ftp.nhm.ac.uk/pub/gcua. Freely available for academic use, commercial users should contact the author. CONTACT [email protected]
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Codon usage bias plays an important role in shaping genomes and genes in unicellular species and multicellular species. Here, we first analyzed codon usage bias in seven Epichloë species and their peramine-coding genes. Our results showed that both natural selection and mutation pressure played a role in forming codon usage bias in seven Epichloë species. All seven Epichloë species contained a ...
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ژورنال
عنوان ژورنال: Molecular Phylogenetics and Evolution
سال: 2019
ISSN: 1055-7903
DOI: 10.1016/j.ympev.2019.106618